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ORIGINAL PAPER
Comprehensive proteomic analysis of the main liver
and attached liver of Glyptosternum maculatum on the basis
of data-independent mass spectrometry acquisition
1
Anhui Polytechnic University, Academy of Biological and Food Engineering, Department of Food Science and Engineering,
241000 Wuhu, China
2
Tibet Academy of Agricultural and Animal Husbandry Sciences, Academy of Aquatic Sciences, 850002 Lhasa, China
3
Tibet Academy of Agricultural and Animal Husbandry Sciences, Institute of Fisheries Science, 850002 Lhasa, China
4
Hefei Normal University, Academy of Life Science, Department of Biotechnology, 230601 Hefei, China
Publication date: 2022-10-25
J. Anim. Feed Sci. 2023;32(1):85-118
KEYWORDS
TOPICS
ABSTRACT
Glyptosternum maculatum Regan is a teleost species endemic to
the Brahmaputra River. This species has two livers, namely the attached liver
(AL), and the main liver (ML). However, the biological functions and molecular
mechanisms of these two livers remain uncharacterised. In this study, we used
a comparative quantitative proteomics involving data-independent acquisition
to elucidate the functions of ML and AL. A total of 63 differentially expressed
proteins (DEPs) were identified. According to the Gene Ontology enrichment
analysis, these proteins are involved in cellular processes, metabolic
processes, and hydrolase activities. Analysis of the Kyoto Encyclopedia of
Genes and Genomes indicated that the enriched pathways among these
DEPs were “pancreatic secretion” and “protein digestion and absorption” (i.e.,
digestive functions). Moreover, 569 highly expressed proteins in both ML and
AL were functionally annotated, revealing their diverse biological activities
that may involve adaptive responses to cold and hypoxic conditions at high
altitudes.
FUNDING
This work was supported by the Key Research and Development Projects in Tibet (No.
ZH20200002), Key Research and Development
Projects in Anhui (No. 201904e01020008), Key
Research and Development Projects in Tibet (No.
XZ202001ZY0040N), Anhui Province Foundation
for Talent in Higher Education (No. jxbjZD22),
Anhui Polytechnic University Scientific Research
Staring Foundation for the Introduction of Talent
(No. 2018YQQ011), Anhui Polytechnic University
Young and Middle-aged Talents Project (No. 2018-
2019), High Level Talent Introduction Project (No.
2018PTJB03), Talent Introduction Project of Hefei
32 Proteomic investigation of main liver and attached liver liver
Normal University (No. 403-60420050) and Qinghai Provincial Key Laboratory of Physical Geography and Environmental Process, Qinghai Provincial
Innovation Platform Construction Special Project
(No. 2020-ZJ-Y06).
CONFLICT OF INTEREST
The Authors declare that there is no conflict
of interest.
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CITATIONS (1):
1.
Label-free and TMT-labeled proteomics methods to compare differences on normal liver + extra-celiac liver of Glyptosternum maculatum
Wu Sun, Yingying Yan, Zafarullah Muhammad, Yufeng Guo, Guoqiang Zhang
Wu Sun, Yingying Yan, Zafarullah Muhammad, Yufeng Guo, Guoqiang Zhang
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